A
about(9.5)
acquisition series(6.1.4)
add images(6.2.7)
align series(6.1.4)
alignment(6.4.7)
alternate format(6.1.3)
area definition(10.4.6)
area of interest(6.3.2)
arithmetic(6.2.7)
astigmatism correction(6.4.3)
autofocus(6.4.3)
auto-increment(6.1.5)
average images(6.1.4)

B
background color(5.1)
bandpass(6.3.4)
beam shift calibration(10.3)
bias exposure(6.1.5)
binning(6.1.5)
border(6.6.2)
bragg filter(6.3.4)
build number(1.0)
build number(9.5)

C
calibration (tomography)(10.3)
calibration (linescan)(6.3.2)
calibration (focus)(6.4.3)
center detail(10.4.5)
circles in fourier space(6.2.6)
chicken wire(6.1.6)
client area(1.2)
clipboard(3.1)
camera command group(6.1)
camera configuration(6.6.4)
camera format(6.1.5)
command window(8.2)
comment(6.2.5)
communication calibration(10.3)
configuration(5.0)
configuration change(5.1)
configuration files(6.6.4)
continuous(6.1.3)
copy(3.1)
copy position(10.4.2)
crosscorrelation(6.1.4)
crosscorrelation scaling(6.2.6)

D
dark exposure(6.1.5)
defocus(6.4.3)
delay series(6.1.4)
detail center(10.4.5)
display configuration(6.6.4)
display offset(5.1)
display setup(6.6.2)
divide images(6.2.7)
dongle(1.1)
dongle(5.3)
double exposure(6.1.1)
double rotation tilt series(6.1.4)
drift(6.4.4)
drift correction(6.4.3)
drift measurement(6.4.4)

E
edit macros(7.1)
edit user macros(6.5)
EM file format (old/new)(6.6.1)
EMMENU(6.0)
execute macros(7.2)
execute user macros(6.5)
exposure(6.1.1)
exposure format(6.1.5)
exposure map(10.6)
exposure mode(6.1.5)
exposure position(10.4)
exposure time(6.1.2)
exit(2.5)

F
FAQ(9.4)
fft offset(5.1)
file format(6.6.1)
file IO(6.6.1)
fill image(6.2.7)
filter in fourier space(6.3.4)
first start(1.1)
flat correction(6.1.5)
flatfields(6.1.6)
focus correction(6.4.3)
focus position(10.4)
focus series(6.1.4)
format(6.1.5)
fourier filter(6.3.4)
fourier space scaling(6.2.6)
function key F2(8.1)
function key F3(8.2)
function key F5(4.4)

G
gain selection(6.1.5)
general(1.0)
getting started(6.0)
goniometer calibration(10.3)
goniometer control (philips)(6.4.2)
goniometer registers(6.4.2)
goniometer tilt(6.4.1)
goto position(10.4.1)

H
hardcopy(6.6.2)
help (TCL commands)(9.1)
high tension update(6.4.6)
highpass(6.3.4)
histogram(6.3.2)
ht update(6.4.6)
ht update (manual)(6.4.8)

I
image(6.2)
image border(6.6.2)
image number(6.2.2)
image numbers (show/hide)(6.6.2)
image scaling(6.2.6)
image series(6.1.4)
image shift calibration(10.3)
image (import)(6.6.1)
image (load)(6.6.1)
image (save)(6.6.1)
import image files(6.6.1)
index (TCL commands)(9.2)
internal mode(5.1)
introduction(1.2)

J

K

L
Layout(5.1)
left intensity(6.3.1)
license code(1.1)
linescan(6.3.2)
load image files(6.6.1)
load positions(10.4.7)
lock position(10.4.5)
logging mode(5.1)
lowpass(6.3.4)

M
macro commands (specials)(7.3)
macro directory(5.1)
macro (double exposure)(6.1.1)
macros edit(7.1)
macros execute(7.2)
magnification(6.4.8)
magnification configuration(6.6.4)
mainpage(6.0)
main window(1.2)
manual high tension(6.4.8)
manual mag(6.0)
manual magnification(6.4.8)
manual trigger(6.1.3)
mask(6.3.6)
mean/deviation(6.2.6)
menubar(1.2)
microscope configuration(6.6.4)
mirror images(6.2.7)
movie(6.1.4)
multiply images(6.2.7)

N
new user(1.1)
normal exposure(6.1.5)

O
online fft offset(5.1)
online zoom offset(5.1)
options(6.0.3)
output window(6.2.1)
output window(8.1)
overlay(4.3)
overview(1.3)

P
page setup(2.2)
paper format(2.2)
pctf(6.3.3)
Phase Contrast Transfer Function(6.3.3)
plugin(6.6.5)
plugin directory(5.1)
position control(10.4)
position copy(10.4.2)
position goto(10.4.1)
position load(10.4.7)
position locking(10.4.5)
position save(10.4.7)
position show(10.4.3)
position update(10.4.4)
post magnification(6.3.2)
postscript(6.6.2)
power(6.3.1)
power intensity(6.3.1)
power left intensity(6.3.1)
power right intensity(6.3.1)
power spectra(6.1.4)
power spectra (averaged)(6.1.4)
power zoom(6.3.1)
preview(2.3)
print(2.4)
print preview(2.3)
print setup(2.1)

Q
quit(2.5)

R
raw file format(6.6.1)
readout speed(6.1.5)
real space scaling(6.2.6)
registry entries(5.1)
right intensity(6.3.1)
ring buffer (6.1.4)
rotate images(6.2.7)
rotate tiles(6.3.5)

S
save image files(6.6.1)
save positions(10.4.7)
Saxton scheme(10.7)
scalebar(6.2.6)
scaling(6.2.6)
scaling examples(6.2.6)
scaling of linescan(6.3.2)
scanning position(10.4)
scheme (linear)(10.6)
scheme (Saxton)(10.6)
scheme (Saxton)(10.7)
screensaver(4.4)
screensaver(5.1)
search position(10.4)
semi automatic mode(10.8)
series(6.1.4)
series align(6.1.4)
shift subpixel(6.3.4)
show image(6.2.1)
show position(10.4.3)
shutter selection(6.1.5)
small linescan(6.3.2)
snapshot(6.4.1)
special macro commands(7.3)
speed selection(6.1.5)
spotscan(10.5)
start EMMENU(6.0)
status(6.0.4)
statusbar(1.2)
statusbar(4.2)
subpixel shift(6.3.4)
subtract images(6.2.7)
system configuration(6.6.4)
system requirements(1.0)

T
tableau(6.1.4)
target defocus(6.4.3)
TEM control(6.4.1)
texture filter(6.3.4)
test pattern(6.2.7)
TIFF file format(6.6.1)
tilt axis calibration(10.3)
tilt series(6.1.4)
tilt series(10.6)
tiling(6.3.5)
titlebar(1.2)
time(6.1.2)
tomography (overview)(10.1)
tomography (references)(10.1)
tomography (start)(10.2)
toolbar(1.2)
toolbar(4.1)
touch images(6.2.7)
tracking position(10.4)
transparency(4.3)

U
update position(10.4.4)
update user data(6.2.5)
user data(6.2.5)
user macros(6.5)

V
version(1.0)
view menu(4.0)
viewport(1.0)
viewport(3.1)
viewport increment(6.6.2)
viewport size(6.6.2)

W
warnings(5.1)
wide linescan(6.3.2)

X

Y

Z
Zemlin tableau(6.1.4)
zoom(1.3)
zoom mode(6.2.1)
zoom offset(5.1)
zoom (power spectra)(6.6.2)

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