On the left is a ribozyme containing D, G and U residues, which was made to react with a substrate containing only A and U. This structure is supported by chemical modification and site-directed mutagenesis studies. Bold G at positions 1, 58 and 63 indicates residues that could not be replaced by D or U without complete loss of catalytic activity. The second image shows the ribozyme containing only D and U, which was made to react with a substrate containing only D and U. This structure is conjectural. Note that this molecule is shortened by one nucleotide at the 5' end and lengthened by six nucleotides at the 3' end compared with the ribozyme shown in the top figure. |